JFinisher

A Java based tool for alignment, editing and manipulation DNA seqs
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JFinisher Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Publisher Name:
  • vitorced
  • Publisher web site:
  • Operating Systems:
  • Mac OS X
  • File Size:
  • 1.4 MB

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JFinisher Description

JFinisher is a free and open-source application for alignment, editing and manipulation of biological sequences. It aims to assist in the finishing of genome assembly. Starting from a reference sequence, the program align contigs using Smith-Waterman local alignment algoritm with auxiliary methods, allowing management of the alignments generated. JFinisher has graphical interface for manipulation and visualization of the actions, uniting features that help in editing the sequences. It has internal projects manageable and ability to export results in the standard formats of the area.JFinisher is a cross-platform utility capable of running on any operating system that comes with Java support (e.g. Mac OS X, Windows, Linux).


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