CLC Protein Workbench free download, CLC Protein Workbench download on software download

Bioinformatics program for advanced protein sequence analysis. CLC Protein Workbench provides a wide range of advanced protein analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench.CLC Protein Workbench is a software solution for scientists and lab researchers working with biochemistry. Here are some key features of "CLC Protein Workbench": · Iintegrated 3D molecular viewer. · 2 types of alignments. · Phylogenetics. · Secondary protein structure prediction. · Signal Peptide Prediction (SignalP). · Transmembrane helix prediction (TMHMM). · Motif search (known patterns). · Pattern discovery (unknown patterns). · BLAST. · Batch processing of multiple analyses in one work-step. · Protein family analysis (PFAM). · Dot plots. · Hydrophobicity analyses. · Antigenicity analyses. · Searches on GenBank, Swiss-Prot, TrEMBL, and PubMed. · Detailed log of actions/analyses performed. Requirements: · 256 MB RAM required. · 512 MB RAM recommended. · 1024 x 768 display recommended. Limitations: · 4 weeks fully functional trial period. What's New in This Release: Deployment: · You can set a path to the default data location used when the Workbench starts for the first time. This is a feature to help system administrators control where new installations per default save their data. Read more... · Support for removing tools accessing the internet (NCBI BLAST, update notifications etc). Read more... General import and export: · Support for import of complex regions from GFF files · Export tables and reports in Excel format. · Import section of user manual re-structured to provide better overview. Read more.... Expression data importers are now described in technical details in a separate section. Read more.... · You can now export multiple sequence lists in fasta format · Forced import of zip files is now supported (it will force import the contents of the zip file) · The standard import now accepts gzip and tar files as well as zip · If a forced import fails, there will be more technical information about what went wrong, allowing you to identify bad formatting of the import files · Both Genbank and gff importer now makes several attempts at naming genes that do not have a gene name. It will iteratively try the following qualifiers: "product", "locus_tag", "protein_id" and "transcript_id" · When importing genbank files where the length stated does not match the actual sequence, a warning is shown but the sequence is accepted. · When exporting in csv format, the Locale settings are used to determine whether comma or semi-colons should be used as delimiter (comma used for US locales) · GFF plug-in has been updated to accept complex annotations Miscellaneous: · Advanced retyping of annotations using the annotation table. Read more... · Improved reporting of situations when a full disk prevents saving of data · Downloading sequences using drag and drop from the search table no longer creates a "Downloading..." node in the folder. The download process can be monitored in the Processes tab. · Extract Sequences moved from File menu to Toolbox-> General Sequence Analysis. Read more... · Better progress feedback on various dialogs Bug-fixes: · Fixed problem displaying the "Copying..." label when copying data and then updating the folder · Fixed problem with naming of tabs. The fix means that on Windows and Linux unsaved data now gets a * rather than make the tab name bold and italics. (This has always been the behavior on Mac OS X).

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