rxncon Easily generate the contingency matrices you need
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generate matrix contingency

rxncon Description

rxncon is a specialized program that's been designed to generate contingency matrices. rxncon can also generate graphical representations of biochemical signaling networks. As its input it uses specially formatted Excel files. To start using rxncon you first have to upload a specially formated Excel file (only .xls is supported). Main features: Automatic visualization with Cytoscape. Automatic generation of rule based models for BioNetGen. Storage of biological facts that can be used for modelling.

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