jPREdictor Was developed foremost for the prediction of cis-regulatory elements
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jPREdictor Tags

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jPREdictor Description

The jPREdictor program was developed foremost for the prediction of cis-regulatory elements. Short sequence fragments, namely transcription factor binding sites, are known to be enriched and clustered in such elements. These binding sites are represented as motifs and for the prediction, they must be known. Using these motifs, it is possible to search them on sequences, to weight them by applying a positive or negative training set (model or background, respectively) and to score a sequence.

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