Viral Orthologous Clusters Easily access the VBRC genome databases.
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sequence protein sequence Genome

Viral Orthologous Clusters Description

Viral Orthologous Clusters (VOCs) is an easy-to-use Java GUI used to access the VBRC genome databases. Viral Orthologous Clusters has a simple and comprehensive interface that will quickly guide you through all its features. Main features: search and extract genome, gene and protein data from the database. select data (e.g. a set of genes) and then analyze it with the other VBRC tools, e.g. Generate multiple alignments with Base-By-Base Create dotplots with JDotter Browse complete genomes with the Viral Genome Organizer (VGO) Run BLAST searches on NCBI and VBRC databases Plot DNA skews with DNAGrapher Create genome maps compare genomes and sets of genomes, e.g. find gene families represented in all poxvirus genomes (core poxvirus genes) find gene families present in variola viruses, but not in cowpox or vaccinia viruses (potential virulence genes) the VBRC uses an Administrator version of VOCs to add genomes, annotate genes and classify gene families

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