Taxonnerator

Clustered barcode sequence data analysis made easy.
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  • Rating:
  • License:
  • Freeware
  • Publisher Name:
  • Mark Blaxter
  • File Size:
  • 5 MB

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Taxonnerator Description

Taxonnerator is a handy, easy to use package designed to help you carry out simple similarity-based annotation of clustered barcode sequence data produced by jMOTU. It generates taxonomic annotation for MOTU by BLASTing representative sequences against a preformatted database of sequences from known organisms (available from this website). Taxonnerator is useful for initial taxonomic investigation of environmental barcode datasets. For each database sequence showing significant similarity to a MOTU, taxonomic information is stored at all taxonomic levels. This allows the end-user to investigate the taxonomic distribution of the sample sequences at multiple levels. Because data are stored in a relational database, they can be queried using structured query language (SQL) in a very flexible manner, or written to output files for further analysis.


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