SimTree An easy way to compare RNA secondary structures
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compare RNA similarity compare RNA structure similarity calculator RNA structure similarity

SimTree Description

SimTree is a lightweight, reliable and easy-to-use piece of software that allows you to find similarities among RNA secondary structures. SimTree is developed using Java as a Command Line-based tool. All you have to do is launch the application and provide two RNA secondary structures. Once the program analyzes the files you will be able to see a similarity score.

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