LDhat Estimate Recombination Rates from Population Genetic Data
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analysis genetics population genetics Recombination recombination rate

LDhat Description

LDhat is a C/C++ written project that was specially designed for the analysis of recombination rates from population genetic data. The following programs are included: · convert: Simple manipulation of DNA sequence data · pairwise: Parametric and nonparametric analyses of recombination · interval: Estimation of variable recombination rates · rhomap: Estimation of variable recombination rates in the presence of hotspots · fin : Simulation of genetic variation data

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