JDet Protein alignment made easy.
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JDet Ranking & Summary

JDet Tags

visualization Align protein retrieve protein analyze protein compare protein text alignment column alignment protein molecule protein graph write alignment formats alignment create alignment document alignment protein identification Protein Synthesizer protein crystallization protein translocation protein list protein visualization alignment visualizeation manipulate alignment alignment manipulation sequence alignment creator make sequence alignment DNA alignment protein extraction protein structures refinement protein structure geometric protein features Sequence alignment regulated protein valudation validate regulated protein Protein Viewer sequence alignment algorithm alignment accuracy Fasta protein database Protein Evolution Protein Test Protein Alignment bayesian alignment protein dichroism protein structures multiple alignment alignment editor Protein Residue Alignment Method evaluate protein complex protein complex prediction view protein complex Protein Browser rank structure alignment Smith-Waterman alignment display alignment view protein sequence explore protein structure view protein spliced alignment pairwise alignment analysis analyze pairwise alignment view alignment file display alignment file view protein sequences protein sequences viewer simulate protein evolution protein evolution simulation find alignment gap locate alignment gap protein sequences alignment align protein alignment analysis NCBI BLAST alignment Visualize Protein align protein sequence protein sequence alignment MASCOT Protein Protein Interaction render protein view protein files manage Protein DataBank protein vizualizer page alignment

JDet Description

JDet is a simple, Java based application specially designed to offer you a bioinformatics protein alignment tool. It covers the visualization of functional important residues and specifity determining positions (SDPs) in proteins. These positions characterize functional specifity in protein subfamilies. JDet provides an 3D cluster visualization tool for the S3Det method and a protein structure viewer which interacts with the alignment panel. Additionally it's possible for the user to add any predefined method to software process.

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