bio library Free and open source Haskell bio-informatics library
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library algorithm bioinformatic bioinformatics library bioinformatic algorithm bioinformatic data structure

bio library Description

Free and open source Haskell bio-informatics library bio library is a collection of algorithms and data structures that are useful when building various bioinformatics-related utilities and tools. Here are some key features of "bio library": · Sequence data type supporting protein and nucleotide sequences and conversion between them, quality data, reading and writing Fasta formatted files, reading TwoBit and phd formats. · Rudimentary support for doing alignments, including dynamic adjustment of scores based on sequence quality and Blast output parsing. · Partly implemented single linkage clustering, and multiple alignment. Requirements: · GHC

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