MutationFinder A free information extraction system that extracts mentions of point mutations from texts
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mutation extract extract information extractor information extraction point mutation

MutationFinder Description

A free information extraction system that extracts mentions of point mutations from texts MutationFinder is a free and open-source, high-performance information extraction system for extracting mentions of point mutations from free text. MutationFinder was developed in the Center for Computational Pharmacology, a part of the Computational Bioscience Program at the University of Colorado Health Sciences Center. On blind test data, MutationFinder achieves a precision of 98.4% and a recall of 81.9% when extracting point mutation mentions. MutationFinder is available as a stand-alone Python script that can be applied to input text, and via an API. For accessibility, three functionally identical implementations of the API are provided, in Python, Java, and Perl. Requirements: · Java

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