GUUGle

A utility for fast exact matching under RNA base pairing rules
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GUUGle Ranking & Summary

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  • Rating:
  • License:
  • Freeware
  • Price:
  • FREE
  • Publisher Name:
  • Wolfgang Gerlach
  • Publisher web site:
  • http://bibiserv.techfak.uni-bielefeld.de/guugle/
  • Operating Systems:
  • Mac OS X
  • File Size:
  • 7 KB

GUUGle Tags


GUUGle Description

A utility for fast exact matching under RNA base pairing rules RNA secondary structure analysis often requires searching for potential helices in large sequence data. GUUGle is a command line based tool that efficiently locates potential helical regions under RNA base pairing rules, which include Watson-Crick as well as G-U pairs. GUUGle accepts a target and a query set of sequences, and determines all exact matches under RNA rules between target and query sequences that exceed a specified length.If you need to create larger output than we permit for online use, or want to incorporate GUUGle into your own pipeline, please download the GUUGle program from the BiBiServ download department.


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