freqAnalysis

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  • Rating:
  • License:
  • Freeware
  • Publisher Name:
  • Giddings Group
  • Operating Systems:
  • Mac OS X
  • File Size:
  • 175 KB

freqAnalysis Tags


freqAnalysis Description

Tool to identify nucleotide motifs in coding DNA sequences freqAnalysis is a free software designed to identify statistically aberrant k-length nucleotide motifs in coding DNA sequences, specifically to identify putative programmed translational frameshift sites. These are short sequences capable of inducing highly efficient ribosomal frameshifting by destabilizing normal ribosome-mRNA interaction. Because of the potentially catastrophic effect of frameshifting on normal protein production, we reasoned, such sites would be selected against by evolution and hence statistically underrepresented in protein-encoding sequences. Requirements: · Java 2 or later


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