StrBio

Java classes useful for development of software for computational structural biology research
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StrBio Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Price:
  • FREE
  • Publisher Name:
  • John-Marc Chandonia
  • Publisher web site:
  • Operating Systems:
  • Mac OS X
  • File Size:
  • 12.7 MB

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StrBio Description

Java classes useful for development of software for computational structural biology research StrBio is a set of Java class libraries for structural biology development. StrBio includes protein format conversion tool, Pred2ary secondary structure prediction, neural net library, printf-based text formatting, Hooke-Jeeves global optimizer, and misc math and statistics. What's New in This Release: · Added Ant build procedure as an alternative to GNU Make. · Renamed classes/ directory to src/ (although both compiled class files and sources are kept together for convenience) · Added JUnit unit tests under test/ · Added some small code snippet examples under examples/cookbook/, and more examples under examples/ · Minor bug fixes and enhancements to various classes. · Added util.HTML class for HTML manipulation, including colorizing FASTA and MSF output for web display · Activated SourceForge mailing list and svn repository. · Manuscript reference added.


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