 | SeqAnFree and C++ sequence analysis library |
| Download | |
SeqAn Ranking & Summary
Advertisement
- License:
- GPL
- Price:
- FREE
- Publisher Name:
- SeqAn Team
- Publisher web site:
- http://www.seqan.de/
- Operating Systems:
- Mac OS X
- File Size:
- 4.2 MB
SeqAn Tags
SeqAn Description
Free and C++ sequence analysis library SeqAn is a free and open source C++ library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. SeqAn applies a unique generic design that guarantees high performance, extensibility, generality, and integration with other libraries.SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance. What's New in This Release: · 5 more applications, i.e. DFI, MicroRazerS, PairAlign, SeqCons, TreeRecon · stable release of RazerS supporting paired-end read mapping and configurable sensitivity · new alignment algorithms, e.g. banded, configurable alignments (overlap, semi-global, ...) · realignment algorithm · NGS data structures and formats, e.g. SAM, Amos, ... · new alphabets, e.g. Dna with base call qualities, profile characters · auxiliary data structures and algorithms, e.g. double ended queue, command line parser · positional scores · CMake support
SeqAn Related Software