Dang Allows you to read PDB files and generate a table for each residue or base
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read generate table table pdb read pdb residue table

Dang Description

Allows you to read PDB files and generate a table for each residue or base Dang is a free and simple UNIX C++ program created to read a Protein DataBank (PDB) molecular structure coordinate file and generates a table of several useful geometric measurements for each residue or base. In its most basic form, Dang writes out dihedral angles (phi, psi, chi#) hence thename. Dang also identifies disulfide bonds. For nucleic acids, the pseudo-rotation angle is generated. The output is formated for easy parsing by awk, grep, sort and other UNIX utilities. The flag -extra will add tau, omega, max B, min OCC, Ca pseudo-dihedral, Ca-Ca distance.Scripts for parsing Dang output into delimited tables are available HERE.

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