BioLayout Express 3D
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BioLayout Express 3D Ranking & Summary

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  • Rating:
  • License:
  • GPL
  • Publisher Name:
  • BioLayout Express3D Team
  • Publisher web site:
  • http://www.biolayout.org/
  • Operating Systems:
  • Mac OS X 10.5 or later
  • File Size:
  • 4 MB

BioLayout Express 3D Tags


BioLayout Express 3D Description

Tools for the visualization and analysis of networks derived from biological systems BioLayout Express 3D is free and easy to use, powerful tool for the visualization and analysis of networks derived from biological systems.Network-based approaches are becoming increasing popular for the analysis of 'omics and other high dimensional data. Networks can be produced from a wide variety of biological relationships, such as interactions between individuals, disease transmission, sequence similarity, metabolic pathways, protein interactions, pathways, regulatory cascades, gene expression, etc. BioLayout Express3D has been specifically designed for visualization, clustering and analysis of large network graphs in two- and three-dimensional space derived primarily, but not exclusively, from biological data. What's New in This Release: · Corrected regional decimal metric support for all continental Europe regions. · Addition of a Navigation Wizard at application startup that will help news users quickly get acquainted with navigating 2D & 3D graphs. · Further developments on the mEPN / graphml graph support: the 2D / 3D renderers are now 100% faithful to the original yEd coordinates, saving & re-loading to-from a mEPN-derived layout file is also perfected and the mEPN notation scheme is fully supported. · Further memory optimisations for rendering edges: saves crucial system memory when loading very large graphs with millions of edges, making much easier to reach the current upper limit with 30k nodes & 3m edges with older 32bit systems and 3Gb of RAM. · More OpenGL / GLSL shading options available for 3D nodes (all of them using GPU Computing). · Preliminarily Signaling Petri Net (SPN) Flow Simulation support utilising the N-Core Parallelism Design Methodology and GPU Computing (still Work In Progress).


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