Bio::Factory::SequenceFactoryI

Bio::Factory::SequenceFactoryI is a Perl interface that allows for generic building of sequences in factories.
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  • Rating:
  • License:
  • Perl Artistic License
  • Price:
  • FREE
  • Publisher Name:
  • Jason Stajich
  • Publisher web site:
  • http://search.cpan.org/~birney/bioperl-1.4/Bio/PopGen/IO.pm

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Bio::Factory::SequenceFactoryI Description

Bio::Factory::SequenceFactoryI is a Perl interface that allows for generic building of sequences in factories. Bio::Factory::SequenceFactoryI is a Perl interface that allows for generic building of sequences in factories which create sequences (like SeqIO).SYNOPSIS# do not use this object directly it is an interface # get a Bio::Factory::SequenceFactoryI object like use Bio::Seq::SeqFactory; my $seqbuilder = new Bio::Seq::SeqFactory('type' => 'Bio::PrimarySeq'); my $seq = $seqbuilder->create(-seq => 'ACTGAT', -display_id => 'exampleseq'); print "seq is a ", ref($seq), "n";A generic way to build Sequence objects via a pluggable factory. This reduces the amount of code that looks like if( $type eq 'Bio::PrimarySeq' ) { ... } elsif( $type eq 'Bio::Seq::RichSeq' ) { ... } Requirements: · Perl


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