semanticSBML A tool that can create, check, annotate, merge SBML (System Biology Markup Language) models
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checker merger SBML merging SBML checking systems biology SBML

semanticSBML Description

A tool that can create, check, annotate, merge SBML (System Biology Markup Language) models semanticSBML is a tool that can create, check, annotate, merge SBML (System Biology Markup Language) models.SBML is a leading standard format for mathematical models in systems biology. Combining different SBML models by hand can be rather tricky; the semanticSBML tools will help you. The program includes a graphical user interface as well as a console interface that can process batch jobs. For tool developers a programming interface is provided.The names in SBML can be chosen arbitrarily; to identify the biological meaning of the model components, semanticSBML requires annotations: species, parameter, compartment, reaction and event tags should be specified by an annotation in a MIRIAM-compliant format according to the proposal by N. LeNovere and A. Finney. If annotations are missing, SBMLannotate can be used to add them. What's New in This Release: · fixed minor bugs

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