Bio::Map::CytoMap

Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands.
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Bio::Map::CytoMap Ranking & Summary

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  • Rating:
  • License:
  • Perl Artistic License
  • Price:
  • FREE
  • Publisher Name:
  • Heikki Lehvaslaiho
  • Publisher web site:
  • http://search.cpan.org/~birney/bioperl-1.4/Bio/Tools/CodonTable.pm

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Bio::Map::CytoMap Description

Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands. Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands.SYNOPSIS use Bio::Map::CytoMap; my $map = new Bio::Map::CytoMap(-name => 'human1', -species => $human); foreach my $marker ( @markers ) { # get a list of markers somewhere $map->add_element($marker); }This is the simple implementation of cytogenetic maps based on Bio::Map::MapI. It handles the essential storage of name, species, type, and units as well as in memory representation of the elements of a map.For CytoMaps type is hard coded to be 'cytogeneticmap' and units are set to '' but can be set to something else. Requirements: · Perl


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