Bio::Factory::SeqAnalysisParserFactoryIBio::Factory::SeqAnalysisParserFactoryI is a Perl interface describing objects capable of creating SeqAnalysisParserI parsers. | |
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Bio::Factory::SeqAnalysisParserFactoryI Ranking & Summary
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- License:
- Perl Artistic License
- Price:
- FREE
- Publisher Name:
- Hilmar Lapp and Jason Stajich
- Publisher web site:
- http://search.cpan.org/~birney/bioperl-1.4/Bio/Factory/SeqAnalysisParserFactoryI.pm
Bio::Factory::SeqAnalysisParserFactoryI Tags
Bio::Factory::SeqAnalysisParserFactoryI Description
Bio::Factory::SeqAnalysisParserFactoryI is a Perl interface describing objects capable of creating SeqAnalysisParserI parsers. Bio::Factory::SeqAnalysisParserFactoryI is a Perl interface describing objects capable of creating SeqAnalysisParserI compliant parsers.SYNOPSIS # initialize an object implementing this interface, e.g. $factory = Bio::Factory::SeqAnalysisParserFactory->new(); # obtain a parser object $parser = $factory->get_parser(-input=>$inputobj, -params=>, -method => $method); # $parser is an object implementing Bio::SeqAnalysisParserI # annotate sequence with features produced by parser while(my $feat = $parser->next_feature()) { $seq->add_SeqFeature($feat); }This is an interface for factory classes capable of instantiating SeqAnalysisParserI implementing parsers.The concept behind the interface is a generic analysis result parsing in high-throughput automated sequence annotation pipelines. See Bio::SeqAnalysisParserI for more documentation of this concept.Requirements:· Perl
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